Whole exome sequencing analysis of intracranial aneurysm in multiplex families from Newfoundland and Labrador

dc.contributor.authorPowell, Amy E.
dc.coverage.spatialNewfoundland and Labrador
dc.date.issued2016-05
dc.description.abstractIntracranial aneurysm (IA) is a vascular condition characterized as a saccular dilatation of the cerebral artery wall. The purpose of this study was to identify genetic variants that cause susceptibility to IA in two multiplex families from Newfoundland and Labrador. Whole exome sequencing was completed for 12 affected individuals from families R1352 and R1256. A filtering strategy was then implemented to identify and prioritize rare variants that were shared by multiple affected family members. In family R1352, two variants were identified as top candidates: C4orf6 c.1A>G, and GIGYF2 c.3494A>G. Both were present in 6/7 exomes from the family, and passed all filtering steps. In family R1256, SPDYE4 c.103C>T was identified as a variant of interest, as it segregated in 10/11 affected individuals. Though each variant exhibited incomplete segregation, all three were absent from 100 local population controls. The absence of a definitive candidate variant in the exome suggests that further study is necessary to gain better understanding of the genetic etiology of this disease.
dc.description.noteIncludes bibliographical references (pages 144-162).
dc.format.extentxiii, 178 pages : illustrations (some color), color maps
dc.format.mediumText
dc.identifier.urihttps://hdl.handle.net/20.500.14783/13711
dc.language.isoen
dc.publisherMemorial University of Newfoundland
dc.rights.licenseThe author retains copyright ownership and moral rights in this thesis. Neither the thesis nor substantial extracts from it may be printed or otherwise reproduced without the author's permission.
dc.subjectIntracranial Aneurysm
dc.subjectSubarachnoid Hemorrhage
dc.subjectWhole Exome Sequencing
dc.subjectGenetics
dc.subjectNext Generation Sequencing
dc.subject.lcshIntracranial aneurysms--Newfoundland and Labrador--Genetic aspects
dc.subject.lcshIntracranial aneurysms--Newfoundland and Labrador--Etiology
dc.subject.lcshNucleotide sequence
dc.subject.meshIntracranial Aneurysm--genetics--Newfoundland and Labrador
dc.subject.meshIntracranial Aneurysm--etiology--Newfoundland and Labrador
dc.subject.meshBase Sequence
dc.titleWhole exome sequencing analysis of intracranial aneurysm in multiplex families from Newfoundland and Labrador
dc.typeMaster thesis
mem.campusSt. John's Campus
mem.convocationDate2016-05
mem.departmentBioMedical Sciences
mem.divisionsBiomedical
mem.facultyFaculty of Medicine
mem.fullTextStatuspublic
mem.institutionMemorial University of Newfoundland
mem.isPublishedunpub
mem.thesisAuthorizedNamePowell, Amy E. (Amy Elizabeth)
thesis.degree.disciplineBioMedical Sciences
thesis.degree.grantorMemorial University of Newfoundland
thesis.degree.levelmasters
thesis.degree.nameM. Sc. Med.

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